We recently developed a minimalistic coarse-grained model for lipids and peptides by using the Drude oscillator approach to model the electrostatic component of Hydrogen bonds. With our models, we were able to simulate membrane induced folding of a cationic ß-hairpin, SVS-1 on POPS model bilayer.
Here is a short animation:
Colors: Hydrophobic tails: green; Serine: cyan; Ester: purple; Phosphate: tan;Peptide backbone: black;LYS: crimson and VAL side chain: pink. All bead sizes exaggerated for clarity.
You can see the peptide fold and freely diffuse on the surface of the membrane.
Another cool thing is that we find membrane-induced peptide folding to be driven by both (a) cooperativity in peptide self interaction (something that is expected for folding) and (b) cooperativity in membrane-peptide interaction (which is pretty cool). For more, check out our latest article.